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metaDE R and RRA R
microarray meta analysis
4.8 years ago lily ▴ 20
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Meta_analysis of microarray data
microarray microarray data Meta Analysis platform
updated 5.8 years ago by 67k • written 5.8 years ago by • 0
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Meta_analysis of different platforms of microarray data
microarray meta analysis cancer Software R
updated 5.9 years ago by 67k • written 5.9 years ago by • 0
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how to convert DEGs indices to gene symbols or gene names which i get during meta analysis through MAMA package using pvalcombination function and me…
MAMA pvalcombination meta analysis metaMA DEGs' indices
6.6 years ago niteshkumar20sept • 0
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meta de r package
meta analysis
7.0 years ago lily ▴ 20
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Meta Analysis on CAMERA results
limma camera cohen d meta analysis
7.8 years ago Andy91 ▴ 60
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meta analysis of clc output(differential expression data )
rnaseq metaseq clc output pvalue meta analysis
updated 7.9 years ago by ▴ 10 • written 7.9 years ago by • 0
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combine different GSE on different GPL
annotation genesymbols meta analysis
8.6 years ago wahaha123 • 0
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Comment: What type of counts data to import for performing Isoform analysis in edgeR by mohammedtoufiq91 ▴ 10
@gordonsmyth I will re-run Salmon with the --numGibbsSamples=50 option. Thank you.
Comment: Differential Expression Genes as Independent Variables by Gordon Smyth 52k
Such an analysis cannot be done in limma. Sorry, I cannot tell you how to do it or even whether it is possible.
Comment: Differential Expression Genes as Independent Variables by abadgerw • 0
The data that is repeated is a quantitative metric of post-mortem pathology across multiple sections. Not all patients have the same number…
Answer: Crossover design with limma by Gordon Smyth 52k
Your experiment is somewhat more elaborate than a classical crossover design because of the period-specific baseline controls. The analyses…
Answer: Differential Expression Genes as Independent Variables by Gordon Smyth 52k
Sorry, your question doesn't make sense to me. There are tens of thousands of genes and you can't run a mixed model analysis with one depen…
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Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
Transcript-level differential expression using DESeq2
Comment: What type of counts data to import for performing Isoform analysis in edgeR
Answer: What type of counts data to import for performing Isoform analysis in edgeR
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